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legend  pdf

structure nameCOMPLEX OF THE DNA BINDING CORE DOMAIN OF THE TRANSCRIPTION FACTOR MEF2A WITH A 20MER OLIGONUCLEOTIDE
referenceK.HUANG et al. EMBO J. V. 19 2615 2000
sourceHOMO SAPIENS
experimentNMR
structural superfamilySRF-like;
reference complex1egw_B
links to other resourcesPDBSum NPIDB BIPA PDIdb DNAproDB
protein sequence
interface signatureRRVK/RRVK

Estimated binding specificities ?

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# IC=10.269 IC/col=0.642 n_of_columns=16 specificity:   
A |   0   8  24  16   0  96  24  24  24  24   0  96  16  24   0   0
C |  96   8  24  56   0   0  24  24  24  24   0   0  16  24  96   0
G |   0  72  24  16   0   0  24  24  24  24   0   0  48  24   0  96
T |   0   8  24   8  96   0  24  24  24  24  96   0  16  24   0   0
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updated Wed May 27 12:51:49 2020