interface graph thumbnail
legend  pdf

structure nameSERUM RESPONSE FACTOR (SRF) CORE COMPLEXED WITH SPECIFIC SRE DNA
(PROTEIN SERUM RESPONSE FACTOR SRF)
referenceL.PELLEGRINI et al. NATURE V. 376 490 1995
sourceHOMO SAPIENS
experimentX-ray (resolution=3.20, R-factor=0.228)
structural superfamilySRF-like;
sequence familySRFtype transcription factor DNAbinding a;
multimeric complexes1hbx_ABG 1hbx_DEH 1srs_AB
reference complex1hbx_A
links to other resourcesPDBSum NPIDB BIPA PDIdb DNAproDB
protein sequence
interface signatureTRTSK

Estimated binding specificities ?

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# IC=5.038 IC/col=0.840 n_of_columns=6 specificity:   
A |   6   0  75   0   9   6
C |   6   0   6   0   6  68
G |   6   0   9  96  75  13
T |  78  96   6   0   6   9
scan!

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updated Mon Jun 1 09:56:06 2020